Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936469.1_cds_XP_016482042.1_73311
CDS Infomation

[gene=LOC107802969] [db_xref=GeneID:107802969] [protein=pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like] [protein_id=XP_016482042.1] [location=complement(11202..13019)] [gbkey=CDS]
Sequence

ATGGCATTTCCTGCTCCAACACTTGAAATAGGGACTTTCTCATGCCGAGATTTCATTACA
AAGAATTCAAGAAAAGACACATTCACACCAATTGACCCTTTTTCTCTTGTACCCAAATGC
AAATCTTTGAGAGACCTTAAGCAAATTCAAGCATTTTCCATAAAAACCCACATGCAAAAT
GATGTCTTTTTTATGAGTAAGCTCATAGATTTTTGCACAGCTGATCCGACACCTGCCTCT
TTGCACCATGCCCACCTCCTGTTTGATCAAATTCCACAACCAGATATAGTCCTATTCAAC
TTCTTGGCCCGTGGTTATGCCCGGAGTGACACCCCATTAAATGCCTTTGTCCTGTTTTTG
AAAATTCTAACATTAGGTGTTGCTCCTGATTTTTATACATTCCCTTCTCTGTTGAAGGCT
TGTGCAGCTGGAGAAGCTTTAGAAGAAGGTAAGCAATTGCATTGCCTTTTGATTAAATAT
GGCCTTAATGACGATATGTATGTTTGTCCTGCACTTATGAATATGTACATTGAGTGTAAT
GACAATGGTTCAGCTCGTTGCGTGTTTGATAGGATACCTGACCCTTGTGTGGTAACGTAT
AATGCGATCATAATGGGTTACGTGAGAAGTAGCGAGCCAAATGAGGCCCTCTTGTTGTTT
CGTGAATTGCAAGGAAAAAAACTTAAGCCTACTGATGTTACAATTTTAGGCGTGGTTTCA
TCATGTGCTTTGTTGGGAGCATTGGAACTGGGGAAGTGGGTATATGAATATGTTAAGAAG
AATGGTTTTGATCAATATGTTAAGGTGAACACTGCACTTATTGATATGTATGCAAAATGT
GGGAGCTTGCCTGATGCAATTTTAGTTTTCGAGAGCATGACTTATAAGGACACTCAAGCA
TGGTCAGCGATGATCATGGCTTATGCTATTCATGGACGTGCTCGTTGTGCAATATCTTTG
TTTCGAGAGATGCAGAACGCTCGAATTACTCCTGATGGAATTACATTTTTGGGTCTATTA
TATGCATGCAACCACAGTGGATTGATTGAAGAGGGTTTTAGATTTTTCAATAGCATGAAA
GAAAGCTACAGGATTGTACCAGGGGTGAAACACTACGGATGCATGTTGGATTTGTTAGCT
CGGGCTGGCCGCCTTAATGATGCTTTTAAGTTCTTAATGGAATTGCCAATTCGGCCTACA
GTTTTACTTTGGCGGACATTGTTATCTGCTTGCAGCAGTCATGGAAATGTGGATTTGGGG
AAGCTGGTAATTGAAAAAATCTTCGAAATGGACAAATCACATAGTGGCGATTATGTGATC
TTTTCAAACATGTGTGCACGAGCTGGGAACTGGGAAGAAGTGAATTATATCTGGAAATTG
ATGAAAGTTAGAGATATTAAGAAAATTCCTGGCTGTAGTACGATAGAGGTTAACAATGTA
ATGCATGAATTCTTCTCTGGGGAGGTTACGCGTATTGAGCACAGGGAGCTCCACCAGGAA
GTTGACAAGTTAATTGAGAAATTGAAATTGGTTGGTTATGTTCCTAATATTTCTATAGCT
TTTCGTCCTGGCCTAGAAAATGAAGAGAAAGAAGCTATTCTGAGGTACCACAGTGAAAAA
TTGGCAATTACTTTTGCTCTTCTTAATAGTCCACCTGGAAAAACAATTCGCGTTGTTAAA
AACCTTAGAATCTGTGGGGACTGCCATTCAGCTGCAAAACTCATATCGCTCATCTTTAAA
CGAAATTTAATTATCAGAGATATGCAAAGGTTTCATCATTTTGAAGGAGGAAAATGTTCT
TGTGGGGATTTTTGGTAA

Peptide Sequence

PEP ID

XP_016482042.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like [Nicotiana tabacum]
Sequence

MAFPAPTLEIGTFSCRDFITKNSRKDTFTPIDPFSLVPKCKSLRDLKQIQAFSIKTHMQN
DVFFMSKLIDFCTADPTPASLHHAHLLFDQIPQPDIVLFNFLARGYARSDTPLNAFVLFL
KILTLGVAPDFYTFPSLLKACAAGEALEEGKQLHCLLIKYGLNDDMYVCPALMNMYIECN
DNGSARCVFDRIPDPCVVTYNAIIMGYVRSSEPNEALLLFRELQGKKLKPTDVTILGVVS
SCALLGALELGKWVYEYVKKNGFDQYVKVNTALIDMYAKCGSLPDAILVFESMTYKDTQA
WSAMIMAYAIHGRARCAISLFREMQNARITPDGITFLGLLYACNHSGLIEEGFRFFNSMK
ESYRIVPGVKHYGCMLDLLARAGRLNDAFKFLMELPIRPTVLLWRTLLSACSSHGNVDLG
KLVIEKIFEMDKSHSGDYVIFSNMCARAGNWEEVNYIWKLMKVRDIKKIPGCSTIEVNNV
MHEFFSGEVTRIEHRELHQEVDKLIEKLKLVGYVPNISIAFRPGLENEEKEAILRYHSEK
LAITFALLNSPPGKTIRVVKNLRICGDCHSAAKLISLIFKRNLIIRDMQRFHHFEGGKCS
CGDFW

Transcript Sequence

Gene sequence data has not been registered.